BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012F07SP1|AL426396
(801 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig627 829 0.0
3x_Contig1492 322 6e-88
>3x_Contig627
Length = 1782
Score = 829 bits (417), Expect = 0.0
Identities = 428/433 (98%)
Strand = Plus / Plus
Query: 1 agacttcatgatttcwcaaccgcaacttcattagcgcaacatctctccactttagttgaa 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1338 agacttcatgatttcacaaccgcaacttcattagcgcaacatctctccactttagttgaa 1397
Query: 61 gagagatttgaaaagacccaggacgagagttaactactcaactttgctttgcttaagaca 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1398 gagagatttgaaaagacccaggacgagagtgaactactcaactttgctttgcttaagaca 1457
Query: 121 caattagccaggctctatttaggatacgcagattatgaaaatgccattcaagctgcaacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1458 caattagccaggctctatttaggatacgcagattatgaaaatgccattcaagctgcaacg 1517
Query: 181 ttcgccttgggtatcatagaatatgacgttactgctacggatattacgaaggcagctatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1518 ttcgccttgggtatcatagaatatgacgttactgctacggatattacgaaggcagctatt 1577
Query: 241 atttctaaccacgttgtaattggtcttgcttctttctttagttccgatgtcgacgctgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1578 atttctaaccacgttgtaattggtcttgcttctttctttagttccgatgtcgacgctgca 1637
Query: 301 ttagatcattgtwatatcttgcttaccttgtcacatgaggtcagttatgtggcagtttta 360
|||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 1638 ttagatcattgtaatatcttgcttaccttgtcacatgaggtcagtaatgtggcagtatta 1697
Query: 361 atcttcaaaatattacattccatgcaatccgaagaagcttctaatattgggctccaagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1698 atcttcaaaatattacattccatgcaatccgaagaagcttctaatattgggctccaagaa 1757
Query: 421 ctacttgattatg 433
|||||||||||||
Sbjct: 1758 ctacttgattatg 1770
>3x_Contig1492
Length = 8701
Score = 322 bits (162), Expect = 6e-88
Identities = 187/192 (97%), Gaps = 3/192 (1%)
Strand = Plus / Minus
Query: 611 gtctagagaaaaagaaagacattacttt-cttatggcagawatctagtttcctcttcccc 669
|||||||||||||||||||||||||||| ||||||||||| |||||||| ||||| ||||
Sbjct: 8701 gtctagagaaaaagaaagacattacttttcttatggcagaaatctagtt-cctctccccc 8643
Query: 670 aacagtccgaatgtttgggacaggttgtcatcagaaattgcttgcagagtctcatcatct 729
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 8642 aacagtccgaatgtttgggacaggttgtcatcagaaattgct-gcagagtctcatcatct 8584
Query: 730 ggacaaaatagaataactcctcttcatttaagtcaaaagctagtcgtgtgtgactccttg 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8583 ggacaaaatagaataactcctcttcatttaagtcaaaagctagtcgtgtgtgactccttg 8524
Query: 790 acgaaggtacaa 801
||||||||||||
Sbjct: 8523 acgaaggtacaa 8512
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5837
Number of Sequences: 1807
Number of extensions: 5837
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 2
length of query: 801
length of database: 10,358,551
effective HSP length: 16
effective length of query: 785
effective length of database: 10,329,639
effective search space: 8108766615
effective search space used: 8108766615
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)